Render a Canonical Public Population-Genomics Report
render_public_report.RdDelegates report planning and generation to the existing population-genomics report engine and translates the resulting report and artifact identities into the stable Phase 10 public API. Output paths, timestamps, platform metadata, Quarto process details, and renderer state remain internal.
Usage
render_public_report(
request,
report,
output_dir,
title = "Population genomics report",
formats = "html",
render = FALSE,
include = NULL,
exclude = NULL
)Arguments
- request
A canonical public API request for
report.render.- report
A
PopgenVCFReportPlanor named list of canonical results.- output_dir
Internal report output directory.
- title
Report title used when constructing a plan from results.
- formats
Requested output formats:
htmland/orpdf.- render
Whether to invoke Quarto. When false, deterministic sources and manifests are written.
- include, exclude
Optional analysis filters used when constructing a report plan.